Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865737.1_cds_XP_016432477.1_28720
CDS Infomation

[gene=LOC107759116] [db_xref=GeneID:107759116] [protein=beta-glucosidase BoGH3B-like] [protein_id=XP_016432477.1] [location=join(65922..66072,66149..66353,66748..66838,67393..67538,67966..68209,68588..68692,68779..68961,69386..69587,69729..70198)] [gbkey=CDS]
Sequence

ATGGATTGTGTTTACAAAGATCCTAATGCACCAGTTGAAGAAAGAGTCAAAGATGTTTTA
TCAAGAATGACACTTGAAGAAAAGATTGGTCAAATGACCCAGATCGAACGAGCTGTTGCT
AATCCTTCTGTTATTAGAGATCGTTATATTGGGAGTGTATTGAGTGGAGGTGGGAGTAGA
CCATTTGAGAATGCAGAGTCAAGTGATTGGGCTGACATGATTGATGAGTTTCAAAAAGGT
GCAGTGGAGACCAGGCTTGGCATTCCCATTTTCTATGGAACAGATGCTATTCATGGGAAT
AATAATGTTTGGGGTGCCACTATTTTTCCTCACAACATTGGGCTTGGAGCCACCAGAGAT
GCTGATTTAGTCAGAAGGATAGGAGTTGTGACAGCTCTTGAAACTAGGGCATGTGGAGCT
CCGTATGCTTTTGCTCCTTGTGTTGCTGTCGCCAAAGACCCTAGATGGGGAAGATTTTAC
GAGAGTTACAGTGAAGATACTGAAGTTGTCAGAAAAATGACCTCTCTTGTTACGGGATTG
CAAGGTCAGCCACCAGAAGGACATCCATATGGCTATCCTTATGTTGCTGGAAGAAATTAT
GTCATGGCATCTGCAAAGCATTTCGTAGGTGATGGGGCAACTGAGAATGGTACAAACGAA
GGAAATACAATAGCATCGCATGATGAAATTTTTAATATCCACCTAGCACCATATATAGAC
TGTATCGCCCGAGGAGTTTGCACTGTTATGGCATCCTACTCCAGCTGGAATGGAGACAAA
ATGCACACTCATCGCTATCTTTTGACAGAGGTCTTGAAAGATAAGCTTGGATTCAAGGGT
CTCGTGATTACAGACTGGGAAGCGCTTGACCGGCTTACTGACCCTCATGGATCAGATTAT
CGTCAATCAATCAAGTCAACCATCAATGCTGGAATTGATATGGTGATGGTGCCATTTAGA
TATGAATTATTCTTAGAGGAGCTGCTATCACTGGTAGAATCTGGGGAGATATCGATGGCC
AGGATAGATGATGCTGTTGAAAGAATCTTGAGAGTCAAATTTGTTGCTGGATTGTTTGAA
CATCCATTTACAGATAGATCATTGATAGAATTGGTTGGTTGTGAGGTACATAGAGATGTA
GCACGTGAAGCCGTTCGTAAATCCTTAGTTTTGTTGAAAAACGGGAAAGATCCAAAGAAA
CCATTTCTTCCTCTAGATAGGAATGCCAAAAAGATCCTTGTCACTGGAACTCATGCTGAT
GATCTTGGTTACCAGTGTGGAGGGTGGACTGCTACATGGACAGGACAAAGTGGCAGAATC
ACAGTTGGCACAACCATATTGGAAGCATTAAGGAAAGTGATAGGAAAGGAAACAGAGATA
GTATTTGAGCCAAATCCTACGCTAGAAACTTTTGCTAATCAAGACTTCTCGTTTGCCATC
GTGGCCATTGGTGAGGCTCCATATTGTGAAACTGGTGGTGACGATCCAGAGTTAAAAATT
CCATTTAATGGAACAGAAATTGCAATCTTTGTTGGTGACAGAGTTCCTACAGTGACGATT
CTGATTTCTGGAAGACCTATGGTATTAGAACCATCGCTCTTGGAAAAAGTAGATGCATTT
GTTGCAGCTTGGTTGCCTGGAACTGAAGGAACAGGAATCACAGATGTCCTTTTTGGAGAT
TATCCATTTCAAGGGAAACTACCTGTGACATGGTTTAAAACTGTTGATCAATTGCCAATG
CATGCTCGAGGGAATTCCGATCCTCTATTTCCTTTCGGATTTGGTCTGACAGCCTAA

Peptide Sequence

PEP ID

XP_016432477.1
PEP Infomation

PREDICTED: beta-glucosidase BoGH3B-like [Nicotiana tabacum]
Sequence

MDCVYKDPNAPVEERVKDVLSRMTLEEKIGQMTQIERAVANPSVIRDRYIGSVLSGGGSR
PFENAESSDWADMIDEFQKGAVETRLGIPIFYGTDAIHGNNNVWGATIFPHNIGLGATRD
ADLVRRIGVVTALETRACGAPYAFAPCVAVAKDPRWGRFYESYSEDTEVVRKMTSLVTGL
QGQPPEGHPYGYPYVAGRNYVMASAKHFVGDGATENGTNEGNTIASHDEIFNIHLAPYID
CIARGVCTVMASYSSWNGDKMHTHRYLLTEVLKDKLGFKGLVITDWEALDRLTDPHGSDY
RQSIKSTINAGIDMVMVPFRYELFLEELLSLVESGEISMARIDDAVERILRVKFVAGLFE
HPFTDRSLIELVGCEVHRDVAREAVRKSLVLLKNGKDPKKPFLPLDRNAKKILVTGTHAD
DLGYQCGGWTATWTGQSGRITVGTTILEALRKVIGKETEIVFEPNPTLETFANQDFSFAI
VAIGEAPYCETGGDDPELKIPFNGTEIAIFVGDRVPTVTILISGRPMVLEPSLLEKVDAF
VAAWLPGTEGTGITDVLFGDYPFQGKLPVTWFKTVDQLPMHARGNSDPLFPFGFGLTA

Transcript Sequence

Gene sequence data has not been registered.